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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs199518 chr17:44854580 A/C LOC644172 chr17:43677491-43679748:- -0.8 -7.92 4.46E-12 Box Plot
THYM rs199519 chr17:44853924 G/A LOC644172 chr17:43677491-43679748:- -0.77 -7.51 3.23E-11 Box Plot
THYM rs199520 chr17:44853872 G/A LOC644172 chr17:43677491-43679748:- -0.77 -7.51 3.23E-11 Box Plot
THYM rs199521 chr17:44853456 G/C LOC644172 chr17:43677491-43679748:- -0.8 -7.84 6.67E-12 Box Plot
THYM rs199521 chr17:44853456 G/C LRRC37A4 chr17:43578685-43595516:- 0.45 7.3 8.72E-11 Box Plot
THYM rs199523 chr17:44848517 C/A LOC644172 chr17:43677491-43679748:- -0.8 -8 3.02E-12 Box Plot
THYM rs199524 chr17:44848438 G/T LOC644172 chr17:43677491-43679748:- -0.8 -8 3.02E-12 Box Plot
THYM rs199525 chr17:44847834 T/G LOC644172 chr17:43677491-43679748:- 1.11 11.98 1.09E-20 Box Plot
THYM rs199525 chr17:44847834 T/G LRRC37A4 chr17:43578685-43595516:- -0.58 -9.21 8.19E-15 Box Plot
THYM rs199526 chr17:44847707 C/G LOC644172 chr17:43677491-43679748:- -0.86 -8.11 1.75E-12 Box Plot
THYM rs199526 chr17:44847707 C/G LRRC37A4 chr17:43578685-43595516:- 0.49 7.63 1.83E-11 Box Plot
THYM rs199527 chr17:44843667 G/A LOC644172 chr17:43677491-43679748:- -0.74 -7.25 1.08E-10 Box Plot
THYM rs199528 chr17:44843136 C/T LOC644172 chr17:43677491-43679748:- 1.11 11.98 1.09E-20 Box Plot
THYM rs199528 chr17:44843136 C/T LRRC37A4 chr17:43578685-43595516:- -0.58 -9.21 8.19E-15 Box Plot
THYM rs199530 chr17:44836653 C/T LOC644172 chr17:43677491-43679748:- -0.78 -7.69 1.34E-11 Box Plot